<HTML><HEAD><TITLE>Motif 19</TITLE></HEAD>
<H2>Information for 16-TGCCAGGACA (Motif 19)</H2>
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<TABLE border="1" cellpading="0" cellspacing="0">
<TR><TD>p-value:</TD><TD>1e-3</TD></TR>
<TR><TD>log p-value:</TD><TD>-7.058e+00</TD></TR>
<TR><TD>Information Content per bp:</TD><TD>1.530</TD></TR>
<TR><TD>Number of Target Sequences with motif</TD><TD>1.0</TD></TR>
<TR><TD>Percentage of Target Sequences with motif</TD><TD>100.00%</TD></TR>
<TR><TD>Number of Background Sequences with motif</TD><TD>67.2</TD></TR>
<TR><TD>Percentage of Background Sequences with motif</TD><TD>0.09%</TD></TR>
<TR><TD>Average Position of motif in Targets</TD><TD>167.0 +/- 0.0bp</TD></TR>
<TR><TD>Average Position of motif in Background</TD><TD>93.4 +/- 79.3bp</TD></TR>
<TR><TD>Strand Bias (log2 ratio + to - strand density)</TD><TD>10.0</TD></TR>
<TR><TD>Multiplicity (# of sites on avg that occur together)</TD><TD>1.00</TD></TR>
<TR><TD>Motif File:</TD><TD><A target="_blank" HREF="motif19.motif">file (matrix)</A><BR/><A target="_blank" HREF="motif19RV.motif">reverse opposite</A></TD></TR>
<TR><TD>SVG Files for Logos:</TD><TD><A HREF="motif19.logo.svg">forward logo</A><BR/><A HREF="motif19RV.logo.svg">reverse opposite</A></TD></TR>
</TABLE>
<H3>Matches to Known Motifs</H3>
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<TR><TD>
<H4>NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer</H4>
<TABLE><TR><TD>
<TABLE>
<TR><TD>Match Rank:</TD><TD>1</TD></TR>
<TR><TD>Score:</TD><TD>0.70</TD</TR>
<TR><TD>Offset:</TD><TD>-1</TD</TR>
<TR><TD>Orientation:</TD><TD>forward strand</TD></TR>
<TR><TD>Alignment:</TD><TD><FONT face="courier">-TGCCAGGACA</FONT><BR><FONT face="courier">TTGCCAAG---</FONT></TD></TR></TABLE>
</TD><TD>
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</TD></TR></TABLE>
</TD></TR>
<TR><TD>
<H4>ATF6/MA1466.1/Jaspar</H4>
<TABLE><TR><TD>
<TABLE>
<TR><TD>Match Rank:</TD><TD>2</TD></TR>
<TR><TD>Score:</TD><TD>0.68</TD</TR>
<TR><TD>Offset:</TD><TD>-1</TD</TR>
<TR><TD>Orientation:</TD><TD>reverse strand</TD></TR>
<TR><TD>Alignment:</TD><TD><FONT face="courier">-TGCCAGGACA---</FONT><BR><FONT face="courier">NTGCCACGTCATCA</FONT></TD></TR></TABLE>
</TD><TD>
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</TD></TR>
<TR><TD>
<H4>NFIC/MA0161.2/Jaspar</H4>
<TABLE><TR><TD>
<TABLE>
<TR><TD>Match Rank:</TD><TD>3</TD></TR>
<TR><TD>Score:</TD><TD>0.68</TD</TR>
<TR><TD>Offset:</TD><TD>-2</TD</TR>
<TR><TD>Orientation:</TD><TD>reverse strand</TD></TR>
<TR><TD>Alignment:</TD><TD><FONT face="courier">--TGCCAGGACA</FONT><BR><FONT face="courier">NNTGCCAAGNN-</FONT></TD></TR></TABLE>
</TD><TD>
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</TD></TR>
<TR><TD>
<H4>CREB3L1/MA0839.1/Jaspar</H4>
<TABLE><TR><TD>
<TABLE>
<TR><TD>Match Rank:</TD><TD>4</TD></TR>
<TR><TD>Score:</TD><TD>0.66</TD</TR>
<TR><TD>Offset:</TD><TD>-1</TD</TR>
<TR><TD>Orientation:</TD><TD>forward strand</TD></TR>
<TR><TD>Alignment:</TD><TD><FONT face="courier">-TGCCAGGACA---</FONT><BR><FONT face="courier">ATGCCACGTCATCA</FONT></TD></TR></TABLE>
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</TD></TR></TABLE>
</TD></TR>
<TR><TD>
<H4>p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer</H4>
<TABLE><TR><TD>
<TABLE>
<TR><TD>Match Rank:</TD><TD>5</TD></TR>
<TR><TD>Score:</TD><TD>0.66</TD</TR>
<TR><TD>Offset:</TD><TD>-1</TD</TR>
<TR><TD>Orientation:</TD><TD>reverse strand</TD></TR>
<TR><TD>Alignment:</TD><TD><FONT face="courier">-TGCCAGGACA---</FONT><BR><FONT face="courier">ATGCCCGGGCATGT</FONT></TD></TR></TABLE>
</TD><TD>
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</TD></TR></TABLE>
</TD></TR>
<TR><TD>
<H4>NFIX/MA0671.1/Jaspar</H4>
<TABLE><TR><TD>
<TABLE>
<TR><TD>Match Rank:</TD><TD>6</TD></TR>
<TR><TD>Score:</TD><TD>0.66</TD</TR>
<TR><TD>Offset:</TD><TD>-2</TD</TR>
<TR><TD>Orientation:</TD><TD>forward strand</TD></TR>
<TR><TD>Alignment:</TD><TD><FONT face="courier">--TGCCAGGACA</FONT><BR><FONT face="courier">CGTGCCAAG---</FONT></TD></TR></TABLE>
</TD><TD>
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</TD></TR>
<TR><TD>
<H4>HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer</H4>
<TABLE><TR><TD>
<TABLE>
<TR><TD>Match Rank:</TD><TD>7</TD></TR>
<TR><TD>Score:</TD><TD>0.66</TD</TR>
<TR><TD>Offset:</TD><TD>0</TD</TR>
<TR><TD>Orientation:</TD><TD>forward strand</TD></TR>
<TR><TD>Alignment:</TD><TD><FONT face="courier">TGCCAGGACA</FONT><BR><FONT face="courier">TGCCAGCB--</FONT></TD></TR></TABLE>
</TD><TD>
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</TD></TR>
<TR><TD>
<H4>Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer</H4>
<TABLE><TR><TD>
<TABLE>
<TR><TD>Match Rank:</TD><TD>8</TD></TR>
<TR><TD>Score:</TD><TD>0.64</TD</TR>
<TR><TD>Offset:</TD><TD>-1</TD</TR>
<TR><TD>Orientation:</TD><TD>reverse strand</TD></TR>
<TR><TD>Alignment:</TD><TD><FONT face="courier">-TGCCAGGACA----</FONT><BR><FONT face="courier">TTTCCTGGAAAGNNN</FONT></TD></TR></TABLE>
</TD><TD>
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</TD></TR></TABLE>
</TD></TR>
<TR><TD>
<H4>SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer</H4>
<TABLE><TR><TD>
<TABLE>
<TR><TD>Match Rank:</TD><TD>9</TD></TR>
<TR><TD>Score:</TD><TD>0.64</TD</TR>
<TR><TD>Offset:</TD><TD>2</TD</TR>
<TR><TD>Orientation:</TD><TD>forward strand</TD></TR>
<TR><TD>Alignment:</TD><TD><FONT face="courier">TGCCAGGACA--</FONT><BR><FONT face="courier">--CAAGGHCANV</FONT></TD></TR></TABLE>
</TD><TD>
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<TR><TD>
<H4>Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer</H4>
<TABLE><TR><TD>
<TABLE>
<TR><TD>Match Rank:</TD><TD>10</TD></TR>
<TR><TD>Score:</TD><TD>0.64</TD</TR>
<TR><TD>Offset:</TD><TD>-3</TD</TR>
<TR><TD>Orientation:</TD><TD>reverse strand</TD></TR>
<TR><TD>Alignment:</TD><TD><FONT face="courier">---TGCCAGGACA--</FONT><BR><FONT face="courier">KGTTGCTAGGMAACA</FONT></TD></TR></TABLE>
</TD><TD>
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